Affymetrix Xenopus laevis annotation data (chip xlaevis)


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Documentation for package ‘xlaevis.db’ version 2.4.5

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xlaevis Bioconductor annotation data package
xlaevis.db Bioconductor annotation data package
xlaevisACCNUM Map Manufacturer identifiers to Accession Numbers
xlaevisCHR Map Manufacturer IDs to Chromosomes
xlaevisENTREZID Map between Manufacturer Identifiers and Entrez Gene
xlaevisENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
xlaevisENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
xlaevisGENENAME Map between Manufacturer IDs and Genes
xlaevisGO Map between Manufacturer IDs and Gene Ontology (GO)
xlaevisGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
xlaevisGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
xlaevisLOCUSID Map between Manufacturer Identifiers and Entrez Gene
xlaevisMAPCOUNTS Number of mapped keys for the maps in package xlaevis.db
xlaevisORGANISM The Organism information for xlaevis
xlaevisORGPKG The Organism information for xlaevis
xlaevisPATH Mappings between probe identifiers and KEGG pathway identifiers
xlaevisPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
xlaevisPMID Map between Manufacturer Identifiers and PubMed Identifiers
xlaevisPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
xlaevisREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
xlaevisSYMBOL Map between Manufacturer Identifiers and Gene Symbols
xlaevisUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
xlaevisUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
xlaevisUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
xlaevis_dbconn Collect information about the package annotation DB
xlaevis_dbfile Collect information about the package annotation DB
xlaevis_dbInfo Collect information about the package annotation DB
xlaevis_dbschema Collect information about the package annotation DB